HPC Training Series - Course 14 "Biosciences using High Performance Computing (HPC) Systems"

Thursday, 19 June 2025 - 10:00


        : Sessions
    /     : Talks
        : Breaks
19 Jun 2025
AM
10:00 Introduction to EuroCC & the training events - Lena Kanellou (Senior Researcher, EuroCC@Greece/Institute of Computer Science of the Foundation for Research and Technology, Hellas (ICS-FORTH))   ()
10:15 Introduction to AUTH’s HPC infrastructure “Aristotelis” and short demo - Alexandra Charampidou (HPC engineer, Aristotle University of Thessaloniki )   ()
10:45 HPC in biomarker and drug target discovery - Nikolaos Dovrolis (Senior Researcher, Department of Medicine, Democritus University of Thrace)   ()
11:15 --- Break ---
11:30 Scalable and Performant Applications for Biomolecular Research: Efficient use of HPC and Cloud - Rossen Apostolov (Director of BioExcel, a Centre of Excellence for Computational Biomolecular Research)   ()
PM
12:00 Introduction to Population (epi-)Genomics- demo on Aristotelis HPC infrastructure - Konstantinos Sagonas (Assistant Professor, School of Biology, Aristotle University of Thessaloniki )   ()
12:45 --- Break ---
13:00 Introduction to RNA-seq Analysis: Basic Concepts in Gene Expression- demo on Aristotelis HPC infrastructure - Korina Karagianni (Ph.D. Candidate, School of Biology, Aristotle University of Thessaloniki)   ()
13:45 Bespoke comparative genomics software architectures: a case-study for future HPC on Aristotelis - Christos Ouzounis (Professor of Bioinformatics, School of Informatics, Aristotle University of Thessaloniki )   ()
14:30 Questions / Open discussion   ()