BEGIN:VCALENDAR
VERSION:2.0
PRODID:-//CERN//INDICO//EN
BEGIN:VEVENT
SUMMARY:Closing remarks
DTSTART;VALUE=DATE-TIME:20261125T113500Z
DTEND;VALUE=DATE-TIME:20261125T114500Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1208@events.grnet.gr
DESCRIPTION:Speakers: George  Georgakilas (ΑΤΗΕΝΑ RC)\nThe workshop 
 concludes with an open discussion addressing participants' questions\, cod
 ing issues\, and common troubleshooting challenges encountered during the 
 hands-on sessions.\n\nhttps://events.grnet.gr/event/223/contributions/1208
 /
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1208/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Hands-on 3: Cell Type Annotation
DTSTART;VALUE=DATE-TIME:20261125T110000Z
DTEND;VALUE=DATE-TIME:20261125T113500Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1207@events.grnet.gr
DESCRIPTION:Speakers: George  Georgakilas (ΑΤΗΕΝΑ RC)\nThis hands-on
  session guides participants through cell-type annotation using differenti
 ally expressed genes\, known cell-type markers\, and an enrichment-based a
 pproach.\n\nhttps://events.grnet.gr/event/223/contributions/1207/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1207/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Cell Type Annotation
DTSTART;VALUE=DATE-TIME:20261125T104500Z
DTEND;VALUE=DATE-TIME:20261125T110000Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1206@events.grnet.gr
DESCRIPTION:Speakers: George  Georgakilas (ΑΤΗΕΝΑ RC)\nThis theoreti
 cal session introduces differential gene expression analysis for identifyi
 ng cluster-specific marker genes. It also discusses cell-type annotation s
 trategies\, their underlying assumptions\, and common challenges and pitfa
 lls.\n\nhttps://events.grnet.gr/event/223/contributions/1206/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1206/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Hands-on 2: Dimensionality Reduction & Clustering
DTSTART;VALUE=DATE-TIME:20261125T101000Z
DTEND;VALUE=DATE-TIME:20261125T104500Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1205@events.grnet.gr
DESCRIPTION:Speakers: Haris Manousaki (ATHENA RC)\nThis hands-on session f
 ocuses on principal component analysis (PCA)\, dimensionality reduction\, 
 and clustering\, with particular emphasis on parameter selection and its i
 mpact on downstream results.\n\nhttps://events.grnet.gr/event/223/contribu
 tions/1205/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1205/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Dimensionality Reduction & Clustering
DTSTART;VALUE=DATE-TIME:20261125T095500Z
DTEND;VALUE=DATE-TIME:20261125T101000Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1204@events.grnet.gr
DESCRIPTION:Speakers: Haris Manousaki (ATHENA RC)\nThis theoretical sessio
 n introduces dimensionality reduction and clustering methods\, explaining 
 their underlying principles and their role in identifying cellular populat
 ions and exploring transcriptomic heterogeneity.\n\nhttps://events.grnet.g
 r/event/223/contributions/1204/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1204/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Hands-on 1: Pre-processing & HVGs Detection
DTSTART;VALUE=DATE-TIME:20261125T092000Z
DTEND;VALUE=DATE-TIME:20261125T095500Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1203@events.grnet.gr
DESCRIPTION:Speakers: Charis  Sinnis (ATHENA RC)\nThis hands-on session gu
 ides participants through preprocessing and HVG selection\, emphasizing im
 portant data characteristics and their influence on analytical decisions.\
 n\nhttps://events.grnet.gr/event/223/contributions/1203/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1203/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Introduction to Single-Cell Transcriptomics
DTSTART;VALUE=DATE-TIME:20261125T090000Z
DTEND;VALUE=DATE-TIME:20261125T090500Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1202@events.grnet.gr
DESCRIPTION:Speakers: George  Georgakilas (ΑΤΗΕΝΑ RC)\nThis introduc
 tory session provides an overview of single-cell RNA sequencing (scRNA-seq
 )\, the Scanpy ecosystem\, and the main objectives of the workshop.\n\nhtt
 ps://events.grnet.gr/event/223/contributions/1202/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1202/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Pre-processing & HVGs Detection
DTSTART;VALUE=DATE-TIME:20261125T090500Z
DTEND;VALUE=DATE-TIME:20261125T092000Z
DTSTAMP;VALUE=DATE-TIME:20261101T033440Z
UID:indico-contribution-223-1201@events.grnet.gr
DESCRIPTION:Speakers: Charis  Sinnis (ATHENA RC)\nThis theoretical session
  introduces quality control\, highlighting key factors to consider when de
 fining QC thresholds. It also covers preprocessing strategies and highly v
 ariable gene (HVG) selection\, explaining their importance in capturing bi
 ological variability and the computational approaches used to identify the
 m.\n\nhttps://events.grnet.gr/event/223/contributions/1201/
LOCATION:
URL:https://events.grnet.gr/event/223/contributions/1201/
END:VEVENT
END:VCALENDAR